adult CB3709 neuron [FBbt_20007137]
Adult brain-intrinsic neuron with its soma in the brain, dorsal to the mushroom body calyx. It has postsynapses in the ipsilateral posterior lateral protocerebrum, the ipsilateral superior lateral protocerebrum, the ipsilateral lateral horn and the ipsilateral superior clamp. It has presynapses in the ipsilateral superior lateral protocerebrum, the ipsilateral mushroom body calyx, the ipsilateral superior medial protocerebrum and the ipsilateral posterior lateral protocerebrum. Its predicted neurotransmitter is glutamate. Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen adult CB3709 neuron in VFB
Term Information
- ID: FBbt_20007137
- Name: adult CB3709 neuron
- Definition: Adult brain-intrinsic neuron with its soma in the brain, dorsal to the mushroom body calyx. It has postsynapses in the ipsilateral posterior lateral protocerebrum, the ipsilateral superior lateral protocerebrum, the ipsilateral lateral horn and the ipsilateral superior clamp. It has presynapses in the ipsilateral superior lateral protocerebrum, the ipsilateral mushroom body calyx, the ipsilateral superior medial protocerebrum and the ipsilateral posterior lateral protocerebrum. Its predicted neurotransmitter is glutamate.
- Synonyms:
- Type:
- Comment: Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/FBbt_20007137",
"symbol": "CB3709",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Class",
"Glutamatergic",
"Nervous_system",
"Neuron"
],
"short_form": "FBbt_20007137",
"unique_facets": [
"Adult",
"Glutamatergic",
"Nervous_system"
],
"label": "adult CB3709 neuron"
},
"description": [
"Adult brain-intrinsic neuron with its soma in the brain, dorsal to the mushroom body calyx. It has postsynapses in the ipsilateral posterior lateral protocerebrum, the ipsilateral superior lateral protocerebrum, the ipsilateral lateral horn and the ipsilateral superior clamp. It has presynapses in the ipsilateral superior lateral protocerebrum, the ipsilateral mushroom body calyx, the ipsilateral superior medial protocerebrum and the ipsilateral posterior lateral protocerebrum. Its predicted neurotransmitter is glutamate."
],
"comment": [
"Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023)."
]
},
"query": "Get JSON for Class",
"version": "08f7a30",
"parents": [
{
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"iri": "http://purl.obolibrary.org/obo/FBbt_00058208",
"types": [
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"Adult",
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"Class",
"Glutamatergic",
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"Neuron",
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"hasScRNAseq"
],
"short_form": "FBbt_00058208",
"unique_facets": [
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"Nervous_system"
],
"label": "adult glutamatergic neuron"
},
{
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"iri": "http://purl.obolibrary.org/obo/FBbt_00001366",
"types": [
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],
"short_form": "FBbt_00001366",
"unique_facets": [
"Nervous_system",
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],
"label": "supraesophageal ganglion neuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00052046",
"types": [
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"Cell",
"Class",
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"Neuron",
"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00052046",
"unique_facets": [
"Adult",
"Nervous_system",
"Neuron"
],
"label": "adult interneuron"
},
{
"symbol": "LHN",
"iri": "http://purl.obolibrary.org/obo/FBbt_00048293",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Class",
"Nervous_system",
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"has_subClass"
],
"short_form": "FBbt_00048293",
"unique_facets": [
"Adult",
"Nervous_system",
"Neuron"
],
"label": "adult lateral horn neuron"
}
],
"relationships": [
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00007055",
"types": [
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"Nervous_system",
"Synaptic_neuropil",
"Synaptic_neuropil_domain"
],
"short_form": "FBbt_00007055",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain"
],
"label": "superior medial protocerebrum"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00007054",
"types": [
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],
"short_form": "FBbt_00007054",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain"
],
"label": "superior lateral protocerebrum"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040044",
"types": [
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"Class",
"Nervous_system",
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],
"short_form": "FBbt_00040044",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain"
],
"label": "posterior lateral protocerebrum"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00007385",
"types": [
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"Synaptic_neuropil",
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],
"short_form": "FBbt_00007385",
"unique_facets": [
"Adult",
"Nervous_system",
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],
"label": "calyx of adult mushroom body"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040048",
"types": [
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"Class",
"Nervous_system",
"Synaptic_neuropil",
"Synaptic_neuropil_subdomain"
],
"short_form": "FBbt_00040048",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_subdomain"
],
"label": "superior clamp"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
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"iri": "http://purl.obolibrary.org/obo/FBbt_00040044",
"types": [
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],
"short_form": "FBbt_00040044",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain"
],
"label": "posterior lateral protocerebrum"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00007054",
"types": [
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"Adult",
"Anatomy",
"Class",
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],
"short_form": "FBbt_00007054",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain"
],
"label": "superior lateral protocerebrum"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0002100",
"label": "has soma location",
"type": "has_soma_location"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00007112",
"types": [
"Entity",
"Adult",
"Anatomy",
"Class",
"Nervous_system"
],
"short_form": "FBbt_00007112",
"unique_facets": [
"Adult",
"Nervous_system"
],
"label": "cell body rind of adult mushroom body calyx"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [],
"def_pubs": [
{
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
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],
"short_form": "Unattributed",
"unique_facets": [
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],
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
]
}
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